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NSF’s Kraken supercomputer

Image: The University of Tennessee and Oak Ridge National Laboratory

Big Computer Power: Improving computer hardware and software to use tens of thousands of processors allows for a deeper understanding of the material world. For instance, the combination of the advanced coding methods and new machines such as NSF’s Kraken at the National Institute for Computational Sciences has enabled simulation of two-particle, many-body theories. These more accurate simulations will help create more reliable models of competing phases in strongly correlated electronic systems.

Such systems may enable new devices by greatly enhancing their sensitivity to various applied fields. Devices based on correlated electronic materials can yield an exponential increase in computing power. In addition, the competing phases these materials display offer new ways to control such devices.

Learn more…

A VIDEO

South of St. Thomas in the Virgin Islands, at a site known locally as the Grammanik Bank, scientists discovered an incredibly lush area of deep-water lettuce corals starting at depths of 200 feet. At this same location, another group of scientists closely observed and videotaped over 300 Bermuda chub spawning, a previously unseen event.

The scientists made their discoveries using closed-circuit rebreathers. Unlike typical SCUBA breathing gear that generates air bubbles, this advanced technology is bubble-free. The rebreathers allowed the University of the Virgin Islands (UVI) scientists to explore unique coral reefs deeper than 100 feet, known as mesophotic reefs. It also minimized disturbance of natural behaviors, such as fish spawning and predation events.

A VIDEO

Researchers at Cornell University developed a new strategy to link organic molecules—locking them into periodic networks—while also leaving empty pores to fill with a second material necessary to create a solar cell. Organizing organic molecules into predictable arrays is the key to improving the performance of organic photovoltaic devices, such as solar cells that promise to be inexpensive, lightweight and flexible

1) Top: Organic compounds assemble into ordered networks ideal for photovoltaic performance. Credit: Fernando Uribe-Romo, Cornell University

2) Bottom: Expanding the pore size of organic networks provides space to add a second material with additional functions. Credit: Eric Spitler, Cornell University

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Swimming in the Fermi Sea: Our world is run by electrons. Switch on a light, browse the Internet or play music on an iPod. These activities occur because electrons move through the wires, chips and headphones. But how do electrons get from one point to another? To do their job, electrons have to get through a solid—a crystal maze of countless atoms. On their way through the solid, electrons push and pull nearby atoms, attracting positive charges and repelling negative ones.

These distortions in the crystal lattice closely follow the electron, and sometimes the electron and the lattice deformations can form a new entity or quasiparticle called a polaron. Since an electron has to drag the lattice distortions with it, the polaron is heavier than an electron moving in empty space. This means a polaron is less inclined than a bare electron to change its speed or direction if it is pulled on. Polarons are ubiquitous in solid-state materials and are responsible for electrical conduction in fullerenes and polymers.

Now, a group led by Martin Zwierlein of the Massachusetts Institute of Technology (MIT) and a member of the NSF-funded MIT-Harvard Center for Ultracold Atoms has discovered a new kind of quasiparticle in an ultracold gas of atoms—a Fermi polaron. The polaron replaces its electron with an impurity atom that swims in a very special environment—a “Fermi sea.” 

Caption: As an electron (red) moves in a crystal lattice of ions, it repels negative ions (blue), creating a distortion and forming a polaron.
Credit: Martin W. Zwierlein, MIT

Read more on SEE Innovation, NSF’s website devoted to science outcomes.

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Midshipman fish use sound to locate each other. Males, for instance, emit sounds that help females locate them. Through a series of experiments, scientists have discovered how these fish pinpoint sound sources underwater. Specifically, they discovered that the fish localize complex sound sources using the direction of acoustic particle motion.

Here, you see male midshipmen fish create nests under rocks (top). Females deposit eggs (bottom).
Credit: Joseph Sisneros, University of Washington
A TEXT POST

Video Game Speeds Language Training

A specially designed video game helps listeners learn to distinguish important differences between language sounds that do not exist in their native language. The learning that takes place during this simple game is similar to what has been demonstrated after 45 hours of intensive language training.

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Each alien emits sounds from a specific auditory category. Credit: Lori Holt, Carnegie Mellon University
A VIDEO

The aerial surfaces of land plants are coated with a complex protective covering called the cuticle. Scientists at Cornell University have answered the long-standing question of how and where cutin—the major structural polymer of plant cuticles—forms. Understanding how plant cuticles are formed and modified in response to adverse environmental conditions provides an important platform for crop improvement in the face of growing concerns about food security.

(Top) surface of a tomato with cuticle stained in red; (bottom, left) surface of a tomato with cuticle in red and cell walls in blue; (bottom, right) surface stained with fluorescent dye.

Credit: Gregory Buda, Cornell University
A VIDEO

A team of plant biologists has identified the gene underlying the double-flowered mutation in the sunflower that was famously captured by Vincent van Gogh in his iconic series of 19th century paintings.

Top: Self-portait with bandaged ear.

Bottom: Sunflower heads (A,C,E) and florets (B,D,F). Van Gogh’s Still Life: Vase with Fifteen Sunflowers (G). Chapman et al. 2012, PLoS Genetics 8(3): e1002628. doi:10.1371/journal.pgen.1002628.

A VIDEO

These photos and illustrations took top awards in the 2012 International Science & Engineering Visualization Challenge, which is sponsored by NSF and the journal Science. From top:

Biomineral Single Crystals
Credit: Pupa U. P. A. Gilbert and Christopher E. Killian; University of Wisconsin, Madison

These fantastical structures are the microscopic crystals that make up a sea urchin’s tooth. Each shade of blue, aqua, green, and purple—superimposed with Photoshop on a scanning electron micrograph (SEM)—highlights an individual crystal of calcite, the abundant carbonate mineral found in limestone, marble, and shells. The curved surfaces of the crystals look nothing like normal calcite crystal faces. Instead of flat sides and sharp edges, the sea urchin produces “incredibly complex, intertwined” curved plates and fibers that interlock and fill space in the tooth as they grow. Though made of a substance normally as soft as chalk, the teeth are hard enough to grind rock, gnawing holes where the sea urchins take shelter from rough seas and predators.

Self Defense
Credit: Kai-hung Fung, Pamela Youde Nethersole Eastern Hospital in Hong Kong

This is no shell game, but a matter of life or death. The clam (left) can snap its bivalve shell shut at the first sign of a threat. The whelk (right) has evolved another strategy: The spiral shell provides a series of barricades to potential invaders. This dramatic example of two different evolutionary strategies for self-defense caught the eye of radiologist Kai-hung Fung.

To create this image Fung used a CT scanner to visualize thin slices of the whelk and clam, then rendered their contours in rainbow colors to highlight their complex structures. Creating such images involves balancing “two sides of a coin,” he says. “One side is factual information, while the other side is artistic.”

X-ray micro-radiography and microscopy of seeds
Credit: Viktor Sykora, Charles University; Jan Zemlicka, Frantisek Krejci, and Jan Jakubek, Czech Technical University

Furred, fringed, and barbed, these fruits with tiny seeds are each no bigger than 3 mm across. To image the seeds’ fine detail, the team used high-resolution, high-contrast x-rays (left) along with traditional microscopy (right). Although high-resolution x-rays are commonly used to visualize the internal structures of small objects without destroying them, according to the authors it has never before been applied to the visualization of seeds.
Connectivity of a Cognitive Computer Based on the Macaque Brain
Credit: Emmett McQuinn, Theodore M. Wong, Pallab Datta, Myron D. Flickner, Raghavendra Singh, Steven K. Esser, Rathinakumar Appuswamy, William P. Risk, and Dharmendra S. Modha

Inspired by the neural architecture of a macaque brain, this ghostly neon swirl is the wiring diagram for a new kind of computer that, by some definitions, may soon be able to think. Over the past 2 years, IBM’s cognitive computing group in San Jose, Calif., has made great strides toward designing a computer that can detect patterns, plan responses, and learn from its mistakes, says Emmett McQuinn, a hardware engineer at IBM who designed the image.

Cerebral Infiltration
Credit: Maxime Chamberland, David Fortin, and Maxime Descoteaux, Sherbrooke Connectivity Imaging Lab

A malignant brain tumor (red mass, left) of this person’s brain, wreathed by fine tracts of white matter. The red fibers signal danger: If severed by the neurosurgeon’s scalpel, their loss could affect the patient’s vision, perception, and motor function. Blue fibers show functional connections far from the tumor that are unlikely to be affected during surgery. Together, the red and blue fibers provide a road map for neurosurgeons as they plan their operations. Computer science graduate student Maxime Chamberland of the Sherbrooke Connectivity Imaging Lab in Canada produces images like these on a weekly basis, he says. Using an MRI technique that detects the direction in which water molecules move along the white matter fibers, he generates a three-dimensional image of functional connections

2012 International Science & Engineering Visualization Challenge

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By studying the motions and temperatures of molecules, primarily ammonia, within substructures of a clump in a gas cloud, astronomers have obtained a first, tantalizing look at a crucial early stage in the formation of a star. An example of the second stage of star formation (not to scale).

Credit: Bill Saxton, NRAO/AUI/NSF
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Drill cores from the Bering Sea reveal large changes in sea ice distribution, temperature and biological productivity over the last 5 million years. During the last period of global warmth, the Bering Sea was ice-free year-round. Read about it … 

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Researchers have collaborated on the design of a robot that can see natural 3-D scenes just as humans do. This brings robots a big step closer to autonomously and safely interacting with humans in such tasks as helping disabled and elderly persons in many of their daily activities, and replacing humans in hazardous situations.

Caption:The center image delineates each 3-D object perceived by a robot.
Credit:Zygmunt Pizlo, Purdue University